A pathway branching in transcription initiation in Escherichia coli

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A pathway branching in transcription initiation in Escherichia coli

In transcription initiation, all RNA polymerase molecules bound to a promoter have been conventionally supposed to proceed into elongation of transcript. However, for Escherichia coli RNA polymerase, evidence has been accumulated for a view that only its fraction can proceed into elongation and the rest is retained at a promoter in non-productive form: a pathway branching in transcription initi...

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Generality of the branched pathway in transcription initiation by Escherichia coli RNA polymerase.

Transcription initiation has been assumed to be a multi-step sequential process, although additional steps could exist. Initiation from the T7A1 promoter, in particular, apparently behaves in vitro in a manner that can be fully explained by the sequential pathway. However, initiation from the lambda P(R)AL promoter has been shown to follow a branched pathway from which a part of the enzyme-prom...

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Dissecting the stochastic transcription initiation process in live Escherichia coli

We investigate the hypothesis that, in Escherichia coli, while the concentration of RNA polymerases differs in different growth conditions, the fraction of RNA polymerases free for transcription remains approximately constant within a certain range of these conditions. After establishing this, we apply a standard model-fitting procedure to fully characterize the in vivo kinetics of the rate-lim...

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Transcription initiation sites within an IS2 insertion in a Gal-constitutive mutant of Escherichia coli.

Insertion of the insertion sequence Is2(I) directly before the galE gene of the galactose operon results in a Gal minus phenotype (1, 2). The Gal-constitutive allele galc200 (and its deletion derivative galc200 delta 31) arise from such a Gal minus mutant by the insertion of LS2(II) DNA within the LS2(I) sequence (3). We have transcribed in vitro a DNA template representing the IS2-galE region ...

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A specific inhibitor of polypeptide-chain initiation in Escherichia coli.

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ژورنال

عنوان ژورنال: Molecular Microbiology

سال: 2006

ISSN: 0950-382X,1365-2958

DOI: 10.1111/j.1365-2958.2006.05058.x